Protein ZmTCP20
ZmTCP20 is a protein in the TCP family.
Information
TF Name: ZmTCP20
Species: Maize
TF Family: TCP
Gene Name(Synonym): TCPTF20
Uniprot ID: A0A1D6PDQ1
Subgenome: 2

Protein ZmTCP20

ZmTCP20 is a protein in the TCP family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d011985DAPseq no logo sequence fimo position
Zm00001d011985DAPseq no logo sequence fimo position
Zm00001d011985ChIPseq no logo sequence fimo position
Zm00001d011985PChIPseq no logo sequence fimo position

Interactions where ZmTCP20 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmTCP20 is the target  
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There are 114 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb364110_T001 from maize genome v5

Amino Acid Sequence
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MDPKFPPPPPLNKTEPTTATTTTTSTAQQQQQQLDPKDYQQQQQQPAQHLQIQIHQSQQDGGGGGKEQQQLQVVAQPGER
RQQALAPKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETVQWLLQQAEPAIVAATGTGTIPASALASV
APSLPSPTSGLARPHHHMWAPSAGFSSPSFLNSAAAGTGDAAGIMQRMGIPAGFELPGASAAGATLGAGGHIGFAPMFAG
HAAAMPGLELGLSQDGHIGVLAAQSISQFYHQVGAAAGGGGQMHHAHGHHHHHHQQQEDGEDDREDGESDDESGQ

MDPKFPPPPPLNKTEPTTATTTTTSTAQQQQQQLDPKDYQQQQQQPAQHLQIQIHQSQQDGGGGGKEQQQLQVVAQPGER
RQQALAPKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETVQWLLQQAEPAIVAATGTGTIPASALASV
APSLPSPTSGLARPHHHMWAPSAGFSSPSFLNSAAAGTGDAAGIMQRMGIPAGFELPGASAAGATLGAGGHIGFAPMFAG
HAAAMPGLELGLSQDGHIGVLAAQSISQFYHQVGAAAGGGGQMHHAHGHHHHHHQQQEDGEDDREDGESDDESGQ

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
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TAGATTTTCTTATTCGCCCCTTCTC...

GRMZM2G034638_T01 from maize genome v3


Related TFome: pUT3377

Amino Acid Sequence
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MDPKFPPPPPLNKTEPTTATTTTTSTAQQQQQQLDPKDYQQQQQQPAQHLQIQIHQSQQDGGGGGKEQQQLQVVAQPGER
RQQALAPKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETVQWLLQQAEPAIVAATGTGTIPASALASV
APSLPSPTSGLARPHHHMWAPSAGFSSPSFLNSAAAGTGDAAGIMQRMGIPAGFELPGASAAGATLGAGGHIGFAPMFAG
HAAAMPGLELGLSQDGHIGVLAAQSISQFYHQVGAAAGGGGQMHHAHGHHHHHHQQQEDGEDDREDGESDDESGQ

Nucleotide Sequence
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TAGATTTTCTTATTCGCCCCTTCTC...

GRMZM2G330719_T01 from maize genome v3

Amino Acid Sequence
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MWPSCDSPSSSPGMAAACPANMGAKPMWPPAPRVAPAAEAPGSSKPAGIPIRCMIPAASPVPAAAEFRKEGEEKPADGAH
MWWCGLASPEVGDGSEGATEASADAGMVPVPVAATMAGSACCSSHWTVSPSDLWPSSRVSWKIRAAQSAGIRIRRPLPST
LVCRSLLELRLGASACCLLSPGCATTCSCCCSFPPPPPSCCDWWIWICRCCAGCCCCCW

Nucleotide Sequence
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CAGAGAAGGAGAAAAGTGGTATGCG...

Zm00001d011985_T001 from maize genome v4

Amino Acid Sequence
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MDPKFPPPPPLNKTEPTTATTTTTSTAQQQQQQLDPKDYQQQQQQPAQHLQIQIHQSQQDGGGGGKEQQQLQVVAQPGER
RQQALAPKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETVQWLLQQAEPAIVAATGTGTIPASALASV
APSLPSPTSGLARPHHHMWAPSAGFSSPSFLNSAAAGTGDAAGIMQRMGIPAGFELPGASAAGATLGAGGHIGFAPMFAG
HAAAMPGLELGLSQDGHIGVLAAQSISQFYHQVGAAAGGGGQMHHAHGHHHHHHQQQEDGEDDREDGESDDESGQ

Nucleotide Sequence
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ATGGACCCCAAGTTCCCCCCACCCC...

Zm00001eb364120_T001 from maize genome v5

Amino Acid Sequence
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MWPSCDSPSSSPGMAAACPANMGAKPMWPPAPRVAPAAEAPGSSKPAGIPIRCMIPAASPVPAAAEFRKEGEEKPADGAH
MWWCGLASPEVGDGSEGATEASADAGMVPVPVAATMAGSACCSSHWTVSPSDLWPSSRVSWKIRAAQSAGIRIRRPLPST
LVCRSLLELRLGASACCLLSPGCATTCSCCCSFPPPPPSCCDWWIWICRCCAGCCCCCW

Nucleotide Sequence
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GTTAACCAAACCATATTTCCTTAAA...


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